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Faculty Profile

Marian Carlson

Address:
701 West 168th Street
Room 922
New York, NY 10032

Phone: 212-305-6314
Fax: 212-305-1741

mbc1@columbia.edu

Education and Training
Ph.D. 1978 Stanford University



Affiliations
Department of Genetics & Development
Department of Microbiology
Institute of Cancer Research


International Collaborations
Function of LKB1 tumor suppressor kinase and relationship to AMPK (with Dr. David Carling, MRC, London)

Training Activities
Graduate Program in Microbiology
Integrated Program in Cellular, Molecular & Biophysical Studies
Graduate Program in Genetics & Development

Marian B. Carlson, PhD
Professor of Genetics & Development
and Microbiology

Research Summary

Our research focuses on the Snf1/AMP-activated protein kinase (AMPK) family, which is essential for stress responses in all eukaryotes.  In humans, AMPK has broad roles in responses to metabolic stress and has been implicated in type 2 diabetes, obesity, and cardiovascular disease. In the yeast Saccharomyces cerevisiae, Snf1 protein kinase regulates transcription, metabolism, and developmental processes in response to nutrient starvation and other stresses. We are interested in the regulation of Snf1/AMPK pathways, with respect to both catalytic activity and subcellular localization. We identified the first upstream kinases for Snf1/AMPK:  three yeast kinases and the mammalian tumor suppressor kinase LKB1 and CaMKK, which activate AMPK.  We found that both LKB1 and CaMKK function in yeast to activate Snf1. This heterologous function has provided the basis for a powerful genetic selection in yeast for mammalian AMPK kinases, which are potential therapeutic targets. We are currrently exploiting this selection to identify new AMPK kinases, and we recently identified TGF-beta-activated kinase (TAK1), a member of the MAPKKK family that is activated by cytokines and bacterial lipopolysaccharide. Evidence supports TAK1 as a candidate for an authentic AMPK kinase in mammalian cells, and further studies are underway.


Selected Publications

1. Momcilovic, M., S.-P. Hong, and M. Carlson. 2006. Mammalian TAK1 activates Snf1 protein kinase in yeast and phosphorylates AMPK in vitro. J. Biol. Chem. July epub. 

2. Woods, A., K. Dickerson, R. Heath, S.-P. Hong, M. Momcilovic, S. R. Johnstone, M. Carlson and D. Carling. 2005. Ca2+/calmodulin-dependent protein kinase kinase- beta acts upstream of AMP-activated protein kinase in mammalian cells. Cell Metabolism 2: 21-33.

3. Hong, S.-P., M. Momcilovic, and M. Carlson. 2005. Function of mammalian LKB1 and Ca2+/calmodulin-dependent protein kinase kinase beta as Snf1-activating kinases in yeast. J. Biol. Chem.  280: 21804-21809.

4. Hedbacker, K., S.-P Hong, and M. Carlson. 2004. Pak1 protein kinase regulates activation and nuclear localization of Snf1-Gal83 protein kinase. Mol. Cell. Biol. 24: 8255-8263.


5. Hong, S.-P., F. C. Leiper, A. Woods, D. Carling, and M. Carlson. 2003.  Activation of yeast Snf1 and mammalian AMP-activated protein kinase by upstream kinases. Proc. Natl. Acad. Sci. USA 100: 8839-8843.

Current Research

1. Yeast Genetic Selection for Human AMPK Kinases
National Institute of Diabetes and Digestive and Kidney Diseases
3/1/05 - 2/28/07

2. Regulation of Snf1 / AMPK Pathway in Yeast
National Institute of General Medical Sciences
07/1984 - 06/2010

Honors and Awards

2004
Fellow, American Academy of Arts and Sciences
2001 President, Genetics Society of America
1996-06 MERIT Award, NIH
1995 Fellow, American Academy of Microbiology
1993 Fellow, American Association for the Advancement of Science

Committee/Council Memberships

2006-2009 Member, Biological Sciences Section Committee of the American Association for the Advancement of Science
2000-2006 Chair, Committee for the Award of the Louisa Gross Horwitz Prize
2000-2005 Committee on Election to Fellowship, American Academy of Microbiology
1996-present March of Dimes Scientific Advisory Council



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